Try to pass repo.ui to reposetup hooks The ui object we received in this function may belong to another repo, which could be confusing from the hook point of view. Trying to use the ui object from the newly created repo should avoid this confusion.

#!/bin/sh

set -e

mkdir test
cd test
echo foo>foo
hg init
hg addremove
hg commit -m "1"
hg verify

hg clone . ../branch
cd ../branch
hg co
echo bar>>foo
hg commit -m "2"

cd ../test
hg pull ../branch
hg verify
hg co
cat foo
hg manifest --debug